Andrew E. Jaffe

Latest

• Genetic and environmental contributions to ancestry differences in gene expression in the human brain
• spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
• VistoSeg: processing utilities for high-resolution Visium/Visium-IF images for spatial transcriptomics data
• BiocMAP: A Bioconductor-friendly, GPU-Accelerated Pipeline for Bisulfite-Sequencing Data
• Amygdala and anterior cingulate transcriptomes from individuals with bipolar disorder reveal downregulated neuroimmune and synaptic pathways
• Genetics and Brain Transcriptomics of Completed Suicide
• recount3: summaries and queries for large-scale RNA-seq expression and splicing
• SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/Bioconductor-powered RNA-seq analyses
• Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods