cluster

Login to the cluster, request a node and change to your project directory in a single command
To be able to do RNA-seq research work in large multi-sample studies you have to be able to analyze large files and thus frequently use a powerful computing environment. In my case, this means that I have to login to a computing cluster frequently.
Last updated on Sat, Feb 17, 2018 7 min read Computing
Using plyr and doMC for quick and easy apply-family functions
A few weeks back I dedicated a short amount of time to actually read what plyr (Wickham, 2011) is about and I was surprised. The whole idea behind plyr is very simple: expand the apply() family to do things easy.
Last updated on Sun, Jan 22, 2017 4 min read rstats