spatialLIBD

Lessons from working on the edge of human brain transcriptomics with spatially-resolved transcriptomics and deconvolution
Invited seminar by Sonia Gandhi
Last updated on Tue, Jun 20, 2023
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Lessons from working on the edge of human brain transcriptomics with spatially-resolved transcriptomics and deconvolution
Navigating human brain gene expression measurements at different resolutions to study psychiatric disorders
Invited seminar by Mina Ryten
Last updated on Tue, Jun 20, 2023
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Navigating human brain gene expression measurements at different resolutions to study psychiatric disorders
Applying Visium Spatial Proteogenomics (Visium-SPG) to study Alzheimer’s Disease
Talk at the Genomics of Brain Disorders 2023 conference
Last updated on Tue, Jun 20, 2023
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Applying Visium Spatial Proteogenomics (Visium-SPG) to study Alzheimer’s Disease
Spatially-resolved Transcriptomics Analysis with R/Bioconductor and Beyond
Invited talk at Human Cell Atlas - Latin America 2022
Last updated on Tue, May 9, 2023
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Spatially-resolved Transcriptomics Analysis with R/Bioconductor and Beyond
Spatially-resolved Transcriptomics Analysis with R/Bioconductor and Beyond
Invited talk at R/Medicine 2022
Last updated on Tue, May 9, 2023
Project Slides
Spatially-resolved Transcriptomics Analysis with R/Bioconductor and Beyond
Applications, limitations, and future directions of spatial transcriptomics technology in the human brain
RNA-seq Workshop at Montgomery College 2022
Last updated on Tue, May 9, 2023
Project Slides
Applications, limitations, and future directions of spatial transcriptomics technology in the human brain
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
Background. Spatially-resolved transcriptomics has now enabled the quantification of high-throughput and transcriptome-wide gene …
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spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
Applications, limitations, and future directions of spatial transcriptomics technology in the human brain
The International Behavioural and Neural Genetics Society (IBANGS) Transcriptomics Workshop 2022
Last updated on Tue, May 9, 2023
Project Slides
Applications, limitations, and future directions of spatial transcriptomics technology in the human brain
Extending Spatial Analysis with R/Bioconductor and beyond
Spatial Biology US 2021
Last updated on Tue, May 9, 2023
Project Slides
Extending Spatial Analysis with R/Bioconductor and beyond
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
We used the 10x Genomics Visium platform to define the spatial topography of gene expression in the six-layered human dorsolateral …
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Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex