Andrew E. Jaffe

Latest

• BiocMAP: A Bioconductor-friendly, GPU-Accelerated Pipeline for Bisulfite-Sequencing Data
• Amygdala and anterior cingulate transcriptomes from individuals with bipolar disorder reveal downregulated neuroimmune and synaptic pathways
• Genetics and Brain Transcriptomics of Completed Suicide
• recount3: summaries and queries for large-scale RNA-seq expression and splicing
• SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/Bioconductor-powered RNA-seq analyses
• spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
• Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods