L. Collado-Torres
L. Collado-Torres
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derfinder
Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders
Growing evidence suggests that human gene annotation remains incomplete; however, it is unclear how this affects different tissues and …
David Zhang __*__
,
Sebastian Guelfi __*__
,
Sonia Garcia Ruiz
,
Beatrice Costa
,
Regina H Reynolds
,
Karishma D'Sa
,
Wenfei Liu
,
Thomas Courtin
,
Amy Peterson
,
Andrew E Jaffe
,
John Hardy
,
Juan Botia
,
Leonardo Collado-Torres
,
Mina Ryten
Preprint
PDF
Cite
Project
DOI
Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information
Genome-wide association studies have generated an increasing number of common genetic variants associated with neurological and …
Sebastian Guelfi __*__
,
Karishma D’Sa __*__
,
Juan Botía __*__
,
Jana Vandrovcova
,
Regina H. Reynolds
,
David Zhang
,
Daniah Trabzuni
,
Leonardo Collado-Torres
,
Andrew Thomason
,
Pedro Quijada Leyton
,
Sarah A. Gagliano
,
Mike A. Nalls
,
International Parkinson’s Disease Genomics Consortium (IPDGC)
,
UK Brain Expression Consortium
,
Kerrin S. Small
,
Colin Smith
,
Adaikalavan Ramasamy
,
John Hardy
,
Michael E. Weale †
,
Mina Ryten †
Preprint
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Project
DOI
From learning to using to teaching to developing R
Keynote to kickoff the CDSB Mexico 2018 R/Bioconductor workshop
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis
Genome-wide association studies have identified 108 schizophrenia risk loci, but biological mechanisms for individual loci are largely …
Jaffe AE
,
Straub R
,
Shin JH
,
Tao R
,
Gao Y
,
Leonardo Collado-Torres
,
Kam-Thong T
,
Xi HS
,
Quan J
,
Chen Q
,
Colantuoni C
,
Ulrich WS
,
Maher BJ
,
Deep-Soboslay A
,
The BrainSeq Consortium
,
Cross AJ
,
Brandon NJ
,
Leek JT
,
Hyde TM
,
Kleinman JE
,
Weinberger DR
Preprint
PDF
Cite
Project
Project
DOI
Reproducible RNA-seq analysis with recount2
recount2 overview for the ICSA 2017 conference
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
RNA-seq samples beyond the known transcriptome with derfinder available via recount2
Showcasing how derfinder and recount2 can be used together to perform annotation-agnostic RNA-seq analyses at SOBP2017
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
Introduction at Kandahar University MPH training event
Introduction of my work to kick off the epidemiology and biostatistics training for Kandahar University MPH faculty.
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
recount: facilitando el análisis de miles de muestras de RNA-seq
Desde que es derfinder hasta como se puede usar con recount2
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
Using Data Science to Study Human Brain Genomic Measurements
Motivating SACNAS2016 attendees to pursue a career in STEM by showcasing my research
Leonardo Collado-Torres
Last updated on Fri, May 14, 2021
Project
Project
Slides
Flexible expressed region analysis for RNA-seq with derfinder
derfinder analysis using expressed region-level and single base-level approaches provides a compromise between full transcript reconstruction and feature-level analysis. The package is available from Bioconductor.
[__L Collado-Torres__](/authors/admin)
,
A Nellore
,
AC Frazee
,
C Wilks
,
MI Love
,
B Langmead
,
RA Irizarry
,
JT Leek
,
AE Jaffe
Preprint
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